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Species belonging to selected taxon:

Picea glauca



ABOUT THIS RECORD

ID: MNEST055386
species: Picea glauca
miRNA family: miR3710
source: miRNEST

Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGGAACCTGACGGGCCTCCA

miRNA*
GGAACCTGACGGGCCTCCTAAG

mismatches: 4
bulges: 1

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pre-miRNA
GCTACACTCTGCAGACGCTTCCAGACTCGTTTGGGAACCTGACGGGCCTCCAAAGTCTTAAAATGCACACTTGCTGCGCTTTGCAGACGCTTCCAGACTC
TGTTGGGAACCTGACGGGCCTCCAAAGTCTTAACATGTCCAATTGCTCCACTCTGCAAGCGCTTCCAGACTCGGTTGGGAACCTGACGGGCCTCCTAAGT
CTTGACATGTCCCTTTGCTTCACTCTG


dot-bracket secondary structure
..........(((((((..((.(((((....(((((.((((.((((..((((((((((..((..(((....))).((((((.(((((.((.....(((..
((((((((..((...((....))..)))))))))).))).....)).....)))))))))))))..)))))...)))))..)))).))))..))))))))
)).))..))))....))).........



SIMILARITIES
miRBase pab-MIR3710: 4e-36

PMRD pta-miR1315: 0.00000001

microPC no hits
UniProt sp|Q7XA42|RGA1_SOLBU: 0.00000003

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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